Changelog#
All notable changes to this project will be documented in this file.
The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.
[Unreleased]#
Added#
Added Module-Compass
Added Turbo-Compass
Added pseudobulking tutorial
Added support for Human1 and Mouse1 GEMs
Added list of core RECON2 reactions for faster computation
Changed#
Documentation is now supported by
Read the DocsUpdated cache computation for deterministic results
Updated postprocessing notebook to use reproducible COMPASS output
Replaced CPLEX with Gurobi Linear Solver
Deprecated#
Deprecated microclustering
Deprecated torque queue
Removed#
Removed COMPASS transposed